edges_analysis._workflow.WorkflowStep

class edges_analysis._workflow.WorkflowStep(function, name=_Nothing.NOTHING, params: frozendict = _Nothing.NOTHING, filemap: Iterable[FileMapEntry | dict | Tuple[Iterable[str | Path], Iterable[str | Path]]] = _Nothing.NOTHING, write: str | None = None)

A single step in a workflow.

Methods

__init__(function[, name, params, filemap, ...])	Method generated by attrs for class WorkflowStep.
add_to_filemap(maps)	Add to the filemap.
asdict([files])	Get the step as a dictionary.
compat(other)	Check if two steps are compatible.
get_all_inputs()	Get a list of input files from a step.
get_all_outputs()	Get a list of output files from a step.
get_output_path(outdir, infile)	Get the output path for the step.
get_outputs_for_input(fl)	Get the outputs for a given input file.
has_input(fl)	Check if the step has a given input file.
has_output(fl)	Check if the step has a given output file.
remove_from_filemap(fl)	Remove an input file from the filemap.

Attributes

function
name
params
filemap
write
kind	Get the kind of step.